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Files

The files contained in this package are as follows. Conventionally, extensions ``.doc '', ``kl1'', and ``com'' indicate documents, KL1 source programs, and compile scripts, respectively.

./df/
DeepForest top directory.
./df/Readme
DeepForest introductory document.
./df/doc/advertise.txt
DeepForest advertisement.
./df/doc/DeepForest.tex
DeepForest document in LaTeX.
./df/doc/DeepForest
DeepForest HTML document directory.
./df/src
DeepForest KL1 source programs.
./df/src/unix
DeepForest KLIC source programs for UNIX based OS.
./df/src/unix/print_sequences.kl1
./df/src/unix/make_ph
./df/src/unix/patch/
./df/src/unix/ancestor.kl1
./df/src/unix/beautify.kl1
./df/src/unix/consensus.kl1
./df/src/unix/dX.kl1
./df/src/unix/divide.kl1
./df/src/unix/dot_matrix.kl1
./df/src/unix/extract_author.kl1
./df/src/unix/extract_fields.kl1
./df/src/unix/factorial.kl1
./df/src/unix/float.kl1
./df/src/unix/format.kl1
./df/src/unix/fx.kl1
./df/src/unix/get_seq.kl1
./df/src/unix/int.kl1
./df/src/unix/interleave.kl1
./df/src/unix/lines2string.kl1
./df/src/unix/list.kl1
./df/src/unix/log_like.kl1
./df/src/unix/make_bib.kl1
./df/src/unix/make_destbl.kl1
./df/src/unix/make_gap_matrix.kl1
./df/src/unix/make_records.kl1
./df/src/unix/make_seq.kl1
./df/src/unix/matrix.kl1
./df/src/unix/newton.kl1
./df/src/unix/plot_like.kl1
./df/src/unix/probability.kl1
./df/src/unix/remove_gap_site.kl1
./df/src/unix/search_str.kl1
./df/src/unix/termio.kl1
./df/src/unix/tree.kl1
./df/src/unix/test.kl1
The test program for DeepForest.
./df/src/unix/traverse.1.0.kl1

./df/src/unix/
DeepForest compile scripts.
./df/src/unix/test_.com
./df/src/unix/make_gap_matrix.com

./df/src/unix
DeepForest perl scripts.
./df/src/unix/make_ph
The perl sciript to add database. descriptions to a phylicp tree format file. This script is not complete.

./df/src/pimos
DeepForest KL1 source programs for PIMOS.




Mon Jan 12 07:51:29 JST 1998